miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Medicago truncatula



ABOUT THIS RECORD

ID: MNEST008347
species: Medicago truncatula
miRNA family: MIRf341
source: miRNEST

Taxonomy by NCBI:
Medicago truncatula Medicago Trifolieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TACTCCCTCCGTCCCTAAATA

miRNA*
TTTAGGGACGGAGGGAGTATG

mismatches: 0
bulges: 0

View larger
pre-miRNA
AGATTGAAAAATACTCCCTCCGTCCCTAAATAAATGACCTAGTTGACTCTGACACACATATCAATGCATATGTTTTATCTTTGATATCTTCAATTCTCTA
CTAAAAAAAATTATAAAATTTAATATTTTAAAAATACTCATCGAGACGAATCCAACAACATCTTACATGATATTATTTATCTTTGTGAATTAGTATAAAA
GTATAGTCAAAGTATGTCAAGTCAATTATGTATATTGTCAACTGGGTCATTTATTTAGGGACGGAGGGAGTATGTTTTATGA


dot-bracket secondary structure
....(((((.(((((((((((((((((((((((((((((((((((((..(((........)))(((((((...((.((..((((((((((.....((.((
((..((((.((((.......)))).))))....((((((((.((((.((((.....((.(((......))).)))))).)))).))))....))))...)
))).))...))).))))))))).)).)))))))...))))))))))))))))))))))))))))))))))))).)))))...



SIMILARITIES
miRBase osa-MIR1862e: 0.001

PMRD osa-miRf11212-akr: 0.000004

microPC miR1439: 0.0002
UniProt no hits

RFAM MIR806: 0.000004
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record





Liczniki na strone;